Round 1
| Pick | Club | Player's Name | Position | School/Previous Club |
|---|---|---|---|---|
| 1 | SJ | Chris Carrieri | F | North Carolina/P-40 |
| 2 | TB | Ali Curtis | F | Duke |
| 3 | DC
(from SJ) |
Mark Lisi | M | Clemson |
| 4 | DC | Ryan Nelsen | M | Stanford |
| 5 | DAL | Joselito Vaca | M | Tahuichi Academy |
| 6 | TB | Craig Demmin | D | Rochester Rhinos (A) |
| 7 | DAL | Ryan Suarez | D | San Jose State |
| 8 | DC
(from SJ) |
Santino Quaranta | F | Project-40 |
| 9 | LA | Brian Mullen | M | Creighton |
| 10 |
CLB (from DC) |
Duncan Oughton | F | Cal St. Fullerton |
| 11 | LA | Isaias Bardales Jr. | F | San Jose St./P-40 |
| 12 | KC | Jose Burciaga Jr. | D | Project-40 |
Round 2
| Pick | Club | Player's Name | Position | School/Previous Club |
|---|---|---|---|---|
| 13 | NY/NJ
(from SJ) |
Rodrigo Faria | F | NY/NJ Stars |
| 14 | TB
(from SJ) |
Devin Barclay | F | Project-40 |
| 15 | DC | Bryan Namoff | M | Bradley |
| 16 | LA | Brian Ching | F | Spokane (PDL) |
| 17 | COL | Stephen Herdsman | D | West Mich. (PDL) |
| 18 | MIA
(from DC) |
Ali Ngon | F | Montreal (A) |
| 19 | DAL | Edward Johnson | F | Project-40 |
| 20 | SJ | Eddie Robinson | M | North Carolina |
| 21 | NE | Nick Downing | D | Maryland/P-40 |
| 22 | LA | Robert Russell | M | Duke |
| 23 | CHI | Justin Evans | M | Pittsburgh (A) |
| 24 | KC | Andrew Gregor | M | Seattle (A) |
Round 3
| Pick | Club | Player's Name | Position | School/Previous Club |
|---|---|---|---|---|
| 25 | DAL | Josue Mayard | M | Montreal (A) |
| 26 | NY/NJ | Kerwyn Jemmott | M | Joe Public (T&T) |
| 27 | CLB | Edson Buddle | F | Long Island/P-40 |
| 28 | DC
(from MIA) |
Craig Ziadie | D |
Richmond (A) |
| 29 |
CHI |
Jim Curtin | D |
Villanova |
| 30 |
CLB |
Kevin Adams | D | Joe Public (T&T) |
| 31 | SJ | Craig Waibel | D |
Seattle (A) |
| 32 | COL | Ryan Lee | D | UCLA |
| 33 |
CHI |
Henry Ring | GK | South Carolina |
| 34 | TB
(from SJ) |
Alberto Munoz | M | Miami Breakers (PDL) |
| 35 | KC | Ben Stafford | F | Wake Forest |
| 36 | COL
(from KC) |
Erik Lukin | F | Illinois- Chicago |
Round 4
| Pick | Club | Player's Name | Position | School/Previous Club |
|---|---|---|---|---|
| 37 | SJ | Fabio Eiedlwein | F | Des Moines (PDL) |
| 38 | MIA | Greg Simmonds | F | Hershey (A) |
| 39 |
CLB |
McKinley Tennyson | F | UCLA |
| 40 | MIA | Cory Gibbs | D |
Brown |
| 41 | COL | Ryan Trout | M |
Virginia |
| 42 |
NE |
Yari Allnutt | M | Rochester (A) |
| 43 | DAL | Adam Zapala | GK |
Stanford |
| 44 | TB | Adam Throop | GK | Chicago (PDL) |
| 45 | LA | Brent Rahim | M | Connecticut |
| 46 | NY/NJ | Martin Klinger | F | Project-40 |
| 47 |
NE |
Fernando Ortiz | D | Tahuichi Acad. (BOL) |
| 48 | KC | Pablo Webster | M | Clemson |
Round 5
| Pick | Club | Player's Name | Position | School/Previous Club |
|---|---|---|---|---|
| 49 | SJ | Cory Woolfolk | F | Stanford |
| 50 | DC | Caleb Norkus | F | North Carolina |
| 51 |
CLB |
Scott Powers | M | Brown |
| 52 | MIA | Teofilo Cubillas | M |
Nova Southern |
| 53 |
NE |
Eric Pogue | GK | Mid-Michigan (PDL) |
| 54 |
NE |
Shaun Tsakiris | M |
UCLA |
| 55 | DAL | Gary DePalma | M | Pittsburgh (A) |
| 56 | TB | Mersim Beskovic | D | Westchester (PDL) |
| 57 | LA | Alex Bengard | M | Cal State Dominguez Hills |
| 58 | NY/NJ | O'Neill Peart | F | Long Island (A) |
| 59 | KC | Narcisco Fernandes | M | Wisconsin |
| 60 | TB
(from KC) |
Hector Navarette | M | Westchester (PDL) |
Round 6
| Pick | Club | Player's Name | Position | School/Previous Club |
|---|---|---|---|---|
| 61 | SJ | Jorge Martinez | M | San Jose State |
| 62 | DC | T.J. Hannig | GK | Indiana |
| 63 |
CLB |
Phil Karn | F | Pittsburgh (A) |
| 64 | MIA | Daouda Kante | D | Florida International |
| 65 | COL | John Carroll | M | Florida International |
| 66 |
NE |
Michael Feller | D | Virginia |
| 67 | DAL | Miguel Saavedra | M | Project-40 |
| 68 |
CHI |
Danny Risch | F | Central Coast (PDL) |
| 69 | LA | Mike Potempa | D | Clemson |
| 70 | NY/NJ | Russell Payne | GK | Boston (A) |
| 71 | DAL | Roberto Najarro | M | UAB |
| 72 | KC | Matt Cross | GK | Brown |